MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus xylosus
19428wA1_WT6
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 75
bases: 2,822,460 bps
CDS: 2,614
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,684
Total number of protein coding genes annotated/found:
2,614
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5046|JADGLO010000014.1
SEQF5046_00114
Genome Viewer
NA
AA
2127/709
30-2156
hypothetical protein
SEQF5046|JADGLO010000004.1
SEQF5046_01818
Genome Viewer
NA
AA
489/163
61-549
IS1182 family transposase ISBpu1
SEQF5046|JADGLO010000008.1
SEQF5046_02549
Genome Viewer
NA
AA
378/126
80-457
IS3 family transposase ISSau4
SEQF5046|JADGLO010000020.1
SEQF5046_00863
Genome Viewer
NA
AA
576/192
104-679
hypothetical protein
SEQF5046|JADGLO010000011.1
SEQF5046_00048
Genome Viewer
NA
AA
546/182
133-678
putative protein YyaP
SEQF5046|JADGLO010000012.1
SEQF5046_00070
Genome Viewer
NA
AA
309/103
186-494
hypothetical protein
SEQF5046|JADGLO010000006.1
SEQF5046_02297
Genome Viewer
NA
AA
1191/397
363-1553
Bicarbonate transporter BicA
SEQF5046|JADGLO010000004.1
SEQF5046_01819
Genome Viewer
NA
AA
594/198
536-1129
IS1182 family transposase ISBpu1
SEQF5046|JADGLO010000016.1
SEQF5046_00145
Genome Viewer
NA
AA
357/119
588-232
hypothetical protein
SEQF5046|JADGLO010000001.1
SEQF5046_00161
Genome Viewer
NA
AA
1884/628
631-2514
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
SEQF5046|JADGLO010000005.1
SEQF5046_02141
Genome Viewer
NA
AA
249/83
651-403
hypothetical protein
SEQF5046|JADGLO010000012.1
SEQF5046_00071
Genome Viewer
NA
AA
183/61
755-937
hypothetical protein
SEQF5046|JADGLO010000012.1
SEQF5046_00072
Genome Viewer
NA
AA
1503/501
979-2481
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase GtfA subunit
SEQF5046|JADGLO010000015.1
SEQF5046_00133
Genome Viewer
NA
AA
906/302
987-1892
Arginase
SEQF5046|JADGLO010000009.1
SEQF5046_02635
Genome Viewer
NA
AA
597/199
1179-583
Recombination protein RecR
SEQF5046|JADGLO010000007.1
SEQF5046_02440
Genome Viewer
NA
AA
459/153
1217-759
Peroxide-responsive repressor PerR
SEQF5046|JADGLO010000016.1
SEQF5046_00146
Genome Viewer
NA
AA
363/121
1262-900
hypothetical protein
SEQF5046|JADGLO010000003.1
SEQF5046_01398
Genome Viewer
NA
AA
1239/413
1479-241
Imidazolonepropionase
SEQF5046|JADGLO010000009.1
SEQF5046_02636
Genome Viewer
NA
AA
318/106
1501-1184
Nucleoid-associated protein
SEQF5046|JADGLO010000006.1
SEQF5046_02298
Genome Viewer
NA
AA
1131/377
1553-2683
N-acetylcysteine deacetylase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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